Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------MSIEIDSEQGVCSVEIEGSRHRAPVDSLRIGTDAEARLSVLYIDGKRLHISEEDAQRLVVAGAEDQRRHLMADD-------------------------- |
2JDA Chain:A ((7-145)) | TAQIVAVTASGYDSEKGHVPANIADGDVKTRWAASGESWVQLELDKEQSIENILIVPFKPTERKLKFSIFYSNDGKNWQPLAEGLETSSADKNGEKLTFTPVTAKYIKLDTFGTDVNNWSAINEIAINSAAALPSRAIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JDA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11474 for 437 contacts (-26.3/contact) +
2D Compatibility (PS) -7494 + (NN) 1025 + (LL) 0
1D Compatibility (HY) -800 + (ID) 450
Total energy: -19193.0 ( -43.92 by residue)
QMean score : 0.065
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