Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQTNLDDTLDVLNDLLQTSKDGEAGFHACAE-DLRDPQLKAAMLEQSRDCAAAADELERIVLELGGKPKDSTSFAGDLHRRWVDLKSLVTGKDEEAVLNE--CERGEDVAKHRYQAALEK---SLPAEIHQVIERQYQGVLRHHDRVRALRDARA
3HIU Chain:A ((3-150))
----SRERLVKWLQDAYAMEKEAETMMAAMASRIEHYPELKRRIEQHVEETQQQSAGVQRCLELLNGSIPTA------------------M--TDEVTKGVGISYAFEHLEIASYRALVVAARSAGEQEVAQICEDILQQEIEMAEWLIEHQEAIV
General information:
TITO was launched using:
RESULT:
Template:
3HIU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1864 for 896 contacts (2.1/contact) +
2D Compatibility (PS) -13815 + (NN) -9355 + (LL) 1516
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -24440.0 ( -27.28 by residue)
QMean score : 0.639
(partial model without unconserved sides chains):
PDB file :
Tito_3HIU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HIU-query.scw
PDB file :
Tito_Scwrl_3HIU.pdb
: