Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVVLYKRLSAPLMERLRERVEVLLVEEPGRDGLARLRDALPEAHGLLGASLRLDAGLLDLAPRLEAIASVSVGVDNYDIDYLDRRGILLSNTPDVLTETTADTGFALILATARRVVELAGWVRAGE---WKKSVGAAQFGTDVHGKTLGIVGMGRIGEALARRGHHGFGMRVLYHS-HSPKPHVEERYAASYRPLDALLEESDFVCLTLPLTAATEGLIGAAQFARMRPQAIFINISRGRVVDEAALIEALAQRRIRAAGLDVFERE-------PLSPDSPLLRLPNVVATPHIGSATEETREAMARCAVDNLLAALAGARPLNLVNPSAWARRRGA |
| 4EBF Chain:A ((18-327)) | --------QLLAPHCELITNQTDSTLTRE---EILRRCRDA--QAMMAFMPD-RVDADFLQACPELRVIGCALKGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGQFRGWQPRF----YGTGLDNATVGFLGMGAIGLAMADR-LQGWGATLQYHAAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVRAVRLEIERCAAQNILQALAGERPINAVN---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EBF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164679 for 2379 contacts (-69.2/contact) +
2D Compatibility (PS) -32574 + (NN) -15299 + (LL) 1664
1D Compatibility (HY) -20800 + (ID) 5850
Total energy: -237538.0 ( -99.85 by residue)
QMean score : 0.496
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