Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGMRTVLTGLAGMLLGSMMPVQADMPRPTGLAADIRWTAYGVPHIRAKDERGLGYGIGYAYARDNACLLAEEIVTARGERARYFGSEGKSSAELDNLPSDIFYAWL---NQPEALQAFWQAQTPAVRQLLEGYAAGFNRFLREADGKTTSCLGQPWLRAIATDDLLRLTRRLLVEGGVGQFADALVAAAPPGAEKVALSGEQAFQVAEQRRQRFRLERGSNAIAVGSERSADGKGMLLANPHFPW-NGAMRFYQMHLTIPGRLDVMGASLPGLPVVNIGFSRHLAWTHTVDTSSHFTLYRLALDPKDPRRYLVDGRSLPLEEKSVAIEVRGADGKLSRVEHKVYQSIYGPLVVWPGKLDWNRSEAYALRDANLENTRVLQQWYSINQASDVADLRRRVEALQGIPWVNTLAADEQGNALYMNQSVVPYLKPELIPACAIPQLVAEGLPA-----LQGQDSRCAWSRDPAAAQAGITPAAQLPVLLRR--DFVQNSNDSAWL-TNPASPLQGFSP-LVSQEKPIGPRARYALSRLQGKQPLEAKTLEEMVTANHVFSADQVLPDLLRLCRDNQGEKSLARACAALAQWDRGANLDSGSGFVYFQRFMQRFAELD----GAWKEPFDAQRPLDTPQGIALDRPQVATQVRQALADAAAEVEKSGIPDGARWGDLQVSTRGQERIAIPGGDGH-----FGVYNAIQSVRKGDHLEVVGGTSYIQLVTFPEEGPKARGLLAFSQSSDPRSPHYRDQTELFSRQQWQTLPFSDRQIDADPQLQRLSIRE |
| 1KEH Chain:A ((9-679)) | -------------------PIAAYKPR----SNEILWDGYGVPHIYGVDAPSAFYGYGWAQARSHGDNILRLYGEARGKGAEYWGPDYEQTT-----------VWLLTNGVPERAQQWYAQQSPDFRANLDAFAAGINAYAQQNPDDISPEVRQ--VLPVSGADVVAHAHRLMNFLYVASPGRTLGEGDPP-------------DLADQ---------GANSWAVAPGKTANGNALLLQNPHLSWTTDYFTYYEAHLVTPD-FEIYGATQIGLPVIRFAFNQRMGITNTVNGMVGATNYRLTLQDGG---YLYDGQVRPFERRQASYRLRQADGSTVDKPLEIRSSVHGPV------FERADGTAVAVRVAGLDRPGMLEQYFDMITAHSFDDYEAAMARMQ-VPTFNIVYADREGTINYSFNGVAPKR--------------AEGDIAFWQGNVPGDSSRYLWTE--------THPLDDLPRVTNPPGGFVQNSNDPPWTPTWPVTYCPANHPSYLAPQTPHSLRAQQSVRLMSENDDLTLERFMALQFSHRAVMADRTLPDLIPAALIDP-DPEVQAAARLLAAWDRDFTSDSRAALL-FEEWARLFAGQNFAGQAAFATPWSLDKPVSTPYGVR-DPKAAVDQLRTAIANTKRKYGAIDRPFG------DASRMILNDVNVPGAAGYGNLGSFRVFTWSDPDENGIRTPVHGET-WVAMIEF-STPVRAYGLMSYGNSRQPGTTHYSDQIERVSRADFRELLLRREQVEA----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KEH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164838 for 5715 contacts (-28.8/contact) +
2D Compatibility (PS) -69122 + (NN) -31100 + (LL) 6832
1D Compatibility (HY) -32800 + (ID) 9600
Total energy: -300628.0 ( -52.60 by residue)
QMean score : 0.449
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