Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVKISQTADVQRFFEEASGQLNERGDPRTKALVRRILDDTAKLIEEMQVTPDEFWKAVDYLNRLGSRQEAGLLAAGLGLEHYLDLLLD--AQDAEAGLTGGTPRTIEGPLYVAGAP--LSDGEARMDDGRDAGTVMFLQGRVSGPDGQPLAGAIVDVWHANTQGTYSYFDSSQSEYNLRRRIRTDADGRYRARSIVPSGYGCPSDGPTQELLDRLGRHGQRPAHIHFFVSAPGHRHLTTQINLAGDRYLWDDFAYATRDGLIGDLRFNDDPAAARDRGVEGGRFAELDFDFQLQASPAPAAERRSQRPRALQG |
| 3HKP Chain:A ((78-266)) | ----------------------------------------------------------------------------------FLDVFIEHSVEEVLARSRKGTMGSIEGPYYIENSPELPSKCTDPMREEDEKITPLVFSGQVTDLDGNGLAGAKVELWHADNDGYYSQFAPHLPEWNLRGTIIADEEGRYEITTIQPAPYQIPTDGPTGQFIEAQNGHPWRPAHLHLIVSAPGKESVTTQLYFKGGEWIDSDVASATKPELILDPKTGDD------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31080 for 1384 contacts (-22.5/contact) +
2D Compatibility (PS) -20368 + (NN) -15116 + (LL) 8596
1D Compatibility (HY) -12000 + (ID) 3550
Total energy: -73518.0 ( -53.12 by residue)
QMean score : 0.487
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