Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLDVFLDFLLGMVLGCLGGLFGIGGGLLAIPALGVIFGLDQQLAQGTALVMVVPNVVLALWRYHQRNRIDPRQAGVLALTGLLCAFLASSVAARIDAARMREAFVIFLLALAGYMFWRLFRRPPQGGATPRYGLPWMGVLGLGAGSLGGLFGVGGGVLATPVLTSVFGLAQVVAQGLALALAAPSTAVALGTYAMHGHVDWRMGIPLALGGLLSISWGVRLAHALPERSLRMAFCAFLALCAVLLLVRG |
4PJ0 Chain:T ((1-11)) | -------------------------------------------------------------------------------------------------METITYVFIFACIIALFFFAIFFREPPRI--------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4PJ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -977 for 34 contacts (-28.7/contact) +
2D Compatibility (PS) -1162 + (NN) -123 + (LL) 15244
1D Compatibility (HY) -800 + (ID) 100
Total energy: 12082.0 ( 355.35 by residue)
QMean score : 0.462
|
|
|