Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLSEPVRRCP--RNGKRIAREPGDRPGTFRLIHPRWAGASVKRAVRACSSCVLLCHAHANPEGTHHVQQHPGARQLHHLPVEATEP--GHRRRPARRAAGLFRRFLAHRRGTQRRPRYPAQLRLPLPLSREGTRMIKRIAQTAGFAGLLAALLLTLLQILWVTPLILEAETYEKSEPVAAQPHEHAPGVA--AHVHDEEAWEPEDGWQRTLSTTGGNLVVAVGFALMLAG----LFTLRAPGQTWQGLLWGLAGYAVFCLAPSLG---LPPELPGTAAADLVQRQYWWIATAAATAVGLALLVFGGNWPLKLVGAVLLALPHLFGAPQPEVHASLAPEALAQRFVVASLVSNALFWAALGLAAAWLFRRNRGGVDA |
| 4U9O Chain:A ((14-332)) | PIAGTPSQVISDGKAIKKVALLGEEYVGMRPTMHVR-VGDEVKK-------AQILFEDKKNPG------------------VKFTSPVSGKVVEINRGAKRVLQSVVIEVAGDDQVTFDKFE---ANQLASLNRDAIKTQLVESG-----------LWTAFRTRPFSKVPAIDSTSEAIFVTAMDTNPLAAEPTVVINEQSEAFVAGLDVLSALTTGKVYVCKKGTSLPRSQQPNVEEHVFDGPHPDHVAWSINYQDVIAVGQLFLTGELYTQRVVSLAGPVVNKPRLVRTVMGAS---LEQLVDSEIMPGE--------VRIISGSVLSGTKATGPHAYLGRYHLQVSVLREG----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U9O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52806 for 2421 contacts (-21.8/contact) +
2D Compatibility (PS) -29704 + (NN) -4540 + (LL) 6464
1D Compatibility (HY) -2800 + (ID) 2500
Total energy: -85886.0 ( -35.48 by residue)
QMean score : 0.091
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