Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEPFRNIGIIGRLGSTQVLDTIRRLKKFLIDRHLHVILEDTIAEVLPGHGLQTCSRKIMGEICDLVVVVGGDGSMLGAARALARH--KVPVLGINRGSLGFLTDIRPDELEAKVGEVLDGQYIVESRFLLDAQVRRGIDSMGQGDA----LNDVVLHPGKSTRMIEFELYIDGQFVCSQKADGLIVATPTGSTAYALSAGGPIMHPKLDAIVIVPMYPHMLSSRPIVVDGNSELKIVVSPNMQIYPQVSCDGQNHFTCAPGDTVTISKKPQKLRLIHPIDHNYYEICRTKLGWGSRLGGGD |
2I2B Chain:A ((37-185)) | ---------------------------------------------------------------EIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTGHLGFYADWRPAEADKLVKLLAKGEYQKVSYPLLKTTVKY-------KEATYLALNESTVKSSGGPFVVD--VVINDIHFERFRGDGLCMSTPSGTTAYNKSLGGALMHPSIEAMQLTEM------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2I2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -72574 for 871 contacts (-83.3/contact) +
2D Compatibility (PS) -15435 + (NN) -7530 + (LL) 8748
1D Compatibility (HY) -10400 + (ID) 2250
Total energy: -99441.0 ( -114.17 by residue)
QMean score : 0.294
|
|
|