Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNAVCESIDASLDARDRPLLSVRGLTRLYGPEKGCQEVDFDLYPGEVLGIVGESGSGKSTLLSLLSGRCPPDAGTVAYRDDGDRWLDLYAASEAERR-TLLRTEWGFVEQNPRDGLRMGVSAGANIGERLMAQGVRHYGRLRQAGLDWLEQVEIDPLRIDDLPRTFSGGMQQRLQIARNLVSAPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELDLAVVIVTHDLAVARLLADRLMVMRRSRVVEAGLTDQILDDPQHPYTQLLVSSVLQP
4YMT Chain:J ((1-240))------------------MIFVNDVYKNFGSLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGEV--------FIDGVKINNGKVNINKVRQKVGMVFQH--FNLFPHLTAIENITLAPVKVKKMNKKEAEELAVDLLAKVGLLDKK-DQYPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMVKEVLNVMKQLANE-GMTMVVVTHEMGFAREVGDRVIFMDDGVIVEEGTPEEIFYRAKNERTREFLSKIL--


General information:
TITO was launched using:
RESULT:

Template: 4YMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152276 for 1974 contacts (-77.1/contact) +
2D Compatibility (PS) -26620 + (NN) -17027 + (LL) 1424
1D Compatibility (HY) -20400 + (ID) 3500
Total energy: -218399.0 ( -110.64 by residue)
QMean score : 0.444

(partial model without unconserved sides chains):
PDB file : Tito_4YMT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YMT-query.scw
PDB file : Tito_Scwrl_4YMT.pdb: