Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVRHFLSFMDYSPEELIGLIRRGSELKDLRNRGVLYEPLKSRVLGMVFEKASTRTRLSFEAGMIQLGGQAIFLSPRDTQLGRGEPIGDSARVMSRMLDGVMIRTFAHATLTEFAAHSKVPVINGLSDDLHPCQLLADMQTFHEHRGSIQGKTV-----AWIGDG-NNMCNSYIEAALKFDFQLRVACPEGYEPKAEFVAL-------AGDRLRVVRDPREAVAGAHLVSTDVWASMGQEDEA-AARIALFRPYQVNAALLDGAAD-DVLFMHCLPAH-----------------RGEEISEELLDDPRSVAWDQAENRLHAQKALLELLIEHAHYA |
4JHX Chain:A ((32-352)) | ---RNFLKLLDFSTKEIQFLIDLSADLKKAKYAGTEQKKLLGKNIALIFEKASTRTRCAFEVAAFDQGAQVTYIGPSGSQIGDKESMKDTARVLGRMYDGIQYRGFGQAIVEELGAFAGVPVWNGLTDEFHPTQILADFLTMLEHS---QGKALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTDVWVSMGESPEAWDERVALMKPYQVNMNVLKQTGNPNVKFMHCLPAFHNDETTIGKQVADKFGMKGLEVTEEVFESEHSIVFDEAENRMHTIKAVM---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JHX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150260 for 2484 contacts (-60.5/contact) +
2D Compatibility (PS) -31257 + (NN) -14272 + (LL) 1608
1D Compatibility (HY) -25200 + (ID) 6000
Total energy: -225381.0 ( -90.73 by residue)
QMean score : 0.516
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