Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTSHLIRIALPGALAAALLASQVSQAADLVPPPGYYAAVGERKGSAGSCPAVPPPYTGSLVFTSKYEGSDSARATLNVKAEKTFRSQIKDITDMERGATKLVTQYMRS-----GRDGDLACALNWMSAWARAGALQSDDFNHTGKSMRKWALG-SLSGAYMRLKFSSSRPLAAHAEQSREIEDWFARLGTQVVRDWSGLPLKKINNHSYWAAWSVMSTAVVTNRRDLFDWAVSEFKVAA------NQVDEQGFLPNELKRRQRALAYH-NYALPPLAMIAAFAQVNGVDLRQENHGALQRLAERVMKGVDDEETFEEKTGEDQDMTDLKVDNKYAWLEPYCALYRCEPKMLEAKKDREPFNSFRLGGEVTRVFSREGGS |
| 2WCO Chain:A ((85-288)) | -----------------------------------------------------------------------------------------AGITFAYGRLWTMTEAYVQEGTGATGDPALLADILRGLDHLSATVYHPATTRYG-NWWEWQIGSPRLLMDITAALYDHLG------ADRVAAACAAVDHFVPDAMLGAYTGTSTGAN--RVDLCRSVALRGVLGRAPAKIALARDALSPVFPYVTKGDGLYADGSFVQH-----TWVAYSGTYGQVMLDGLGRLFTLLAGSEWEVTDPGRQLVLDSVE------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WCO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43688 for 1418 contacts (-30.8/contact) +
2D Compatibility (PS) -20324 + (NN) -4433 + (LL) 9892
1D Compatibility (HY) -400 + (ID) 1100
Total energy: -60053.0 ( -42.35 by residue)
QMean score : 0.341
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