Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASHELDYRILGESMQTVEIELDPGETVI-------AEAGAMNYMTGDIRFTARMGDGSDGSLLGKLWSAGKRKLGGESVFMTHFTNEGQGKQHVAFAAPYPGSVVAVDLDDVGGRLFCQKDSFLC---AAYGTRVGIAFTKRLGAGFFGGEG-------------FILQKLEGDGLVFVHAGGTL------IRRQLNGETLRVDTGCLVAFTDGIDY------------DVQLAGGLK---------SMLFGGEGLLL--TTLKGSGTV--WLQSLPFSRLAGRIY---DATFRAREEVRTNNG------------------------------------------ |
| 2IU8 Chain:A ((21-366)) | MSQSTYSLEQLADFLKV-EFQGNGATLLSGVEEIEEAKTAHITFLDNEKYAKHLKSSEAGAIIISRTQFQKYRDLNKNFLITSESPSLVFQKCLELFITPVDSGFPGIHPTAVIHPTAIIEDHVCIEPYAVVCQHAHVGSACHIGSGSVIGAYSTVGEHSYIHPRVVIRERVSIGKRVIIQPGAVIGSCGFGYVTSAFGQHKHLKHLGKVIIEDDVEIGANTTIDRGRFKHSVVREGSKIDNLVQIAHQVEVGQHSMIVAQAGIAGSTKIGNHVIIGGQAGITGHICIADHVIMMAQTGVTKSITSPGIYGGAPARPYQEIHRQVAKVRNLPRLEERIAALEKLVQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83885 for 1685 contacts (-49.8/contact) +
2D Compatibility (PS) -26035 + (NN) -1799 + (LL) 192
1D Compatibility (HY) -10000 + (ID) 1500
Total energy: -123027.0 ( -73.01 by residue)
QMean score : 0.173
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