Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLNTPRNKPSRTETEAVAASSGRSAVGRRDYTEQLRRAARRNAWDLYGEHFY-
1AFP Chain:A ((1-51))
ATYNGKCYKKDN--ICKYKAQSGKTAI-CKCYVKKCPRDGAKCEFDSYKGKCYC
General information:
TITO was launched using:
RESULT:
Template:
1AFP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 18134 for 326 contacts (55.6/contact) +
2D Compatibility (PS) -4797 + (NN) 1137 + (LL) -16
1D Compatibility (HY) -2800 + (ID) 550
Total energy: 11108.0 ( 34.07 by residue)
QMean score : 0.056
(partial model without unconserved sides chains):
PDB file :
Tito_1AFP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFP-query.scw
PDB file :
Tito_Scwrl_1AFP.pdb
: