Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------MPAETPPLRPDADPPQCALPEARPDRDASTKLRAAVLGANDGLVSNLCLVMGVAGASMAHSSIVLTGMAGLVSGACSMALGEWLSVTNARE---MASKRIAE------------EERLLRLCPNTETQELIDIFTAKGLSEVSARRVALQLMNDGRGALDTLSR---------EALGIDPTELGGNPWNAA-GTSFLLFSLGALVPVAPFLFLDGAAALVASLLSSLLALLFSGAVTARFTGRPLAFSALRQVLVGTLAAAFTYGLGTALGVGLG-------------------------------------------------- |
| 1V72 Chain:A ((6-350)) | RPPALGFSSDNIAGASPEVAQALVKHSSGQAGPYGTDELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLDEIEAIGDVCKSS-SLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLAAEAIVLFNTSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLDSAMIDALLKAGFGFYHDRWGPNVVRFVTSFATTAEDVDHLLNQVRLAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82360 for 2106 contacts (-39.1/contact) +
2D Compatibility (PS) -25807 + (NN) -1972 + (LL) 192
1D Compatibility (HY) 2000 + (ID) 1450
Total energy: -109397.0 ( -51.95 by residue)
QMean score : 0.158
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