Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAADRVMQSYGRCCASTGFFDDFYRHFLASSPQIRAKFATT-------D--MTAQKHLLRAGIMNLVMYARGMSDSKLRALGASHSRAALDIRPELYDLWLDALLMAVAEHD-RDCDAETRDAWRDVMGRGIAVIKSYY
1CG5 Chain:B ((6-140))
-DQEHYIKGVWKDVDH-KQITAKALERVFVVYPWTTRLFSKLQGLFSANDIGVQQHADKVQRALGEAIDDLKKV-EINFQNLSGKHQE--IGVDTQNFKLLGQTFMVELALHYKKTFRPKEHAAAYKFFRLVAEALSSNY
General information:
TITO was launched using:
RESULT:
Template:
1CG5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73446 for 872 contacts (-84.2/contact) +
2D Compatibility (PS) -13344 + (NN) -7014 + (LL) 440
1D Compatibility (HY) -5200 + (ID) 550
Total energy: -99114.0 ( -113.66 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_1CG5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CG5-query.scw
PDB file :
Tito_Scwrl_1CG5.pdb
: