Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYSKIPAGKDLPNDIYVAIEIPANHAPIKYEIDKDTDCLFVDRFMATPMFYPANYGFIPNTLADDGDPLDVLVVTPYPVAPGSVIRARPVGVLHMTDEAGGDAKLIAVPHDKLSVLYKDVKEYTDLPALLLEQIKHFFENYKDLEKGKWVKVEGWGNADAARAEITKAVAAFQK
2AU7 Chain:A ((1-171))
-SLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDQFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEI---VASFER
General information:
TITO was launched using:
RESULT:
Template:
2AU7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98340 for 1385 contacts (-71.0/contact) +
2D Compatibility (PS) -19083 + (NN) -11779 + (LL) 468
1D Compatibility (HY) -20000 + (ID) 6050
Total energy: -154784.0 ( -111.76 by residue)
QMean score : 0.604
(partial model without unconserved sides chains):
PDB file :
Tito_2AU7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AU7-query.scw
PDB file :
Tito_Scwrl_2AU7.pdb
: