Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNPQEHA---VCLEMLTRLARAAGSAGMVGGQAIDLGS----VGVALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPSADPLRQLARYIVERRN |
| 4LLS Chain:A ((35-311)) | --------VQAHFDKVLAAFEPLP------IVEAMAHAT-SGGKRLRGFLVLETARLHDIAAGEAIWSATAIEALHAYSLVHDDLPCMDNDDMRRGQPTVHKKWDDATAVLAGDALQTLAFELVT----HPGASASAEVRADLALSLARASGAQGMVLGQALDIAAETARAPLSLDE--ITRLQQGKTGALIGWSAQAGA----RLAQADTAALKRYAQALGLAFQIADDILDVTGDSAQVGKAVGKDASAGKATFVSLLGLDAARARAMSLIDEACDSLATYGAKADTLRETARFVVRRTH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LLS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100766 for 2316 contacts (-43.5/contact) +
2D Compatibility (PS) -30487 + (NN) -28921 + (LL) 2652
1D Compatibility (HY) -17600 + (ID) 6450
Total energy: -181572.0 ( -78.40 by residue)
QMean score : 0.474
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