Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAPLMHRFHSFVAASAVAIALCVGTAHAGLIAQGTRVVFPASEREVTLRVSNTS-GTPVLAQAWID--DGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIA-YLKAPLPTDRESLFWLNILEVPPRDEDE--NNALQFSFRSRFKLFFRPSQLK-SVDSAAGKLQWKFLESGGAGKKTVVQVNNPTPYYVSFASVELIVDGRVMSVGKGMVAPFSTKEFDWQGNPKNMEAASVRYEVINDYGGRNTHDRALGK
1QUN Chain:A ((1-195))
----------------------------GVALGATRVIYPAGQKQVQLAVTNNDENSTYLIQSWVENADGVKDGR-------FIVTPPLFAMKGKKENTLRILDATNNQLPQDRESLFWMNVKAIPSMDKSKLTENTLQLAIISRIKLYYRPAKLALPPDQAAEKLRFR----RSANSLTLI---NPTPYYLTV--TELNAGTRVLE--NALVPPMGESAVKL---------SNITYRTINDYGA----------
General information:
TITO was launched using:
RESULT:
Template:
1QUN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82481 for 1249 contacts (-66.0/contact) +
2D Compatibility (PS) -19866 + (NN) -8159 + (LL) 4624
1D Compatibility (HY) -16400 + (ID) 3500
Total energy: -125782.0 ( -100.71 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_1QUN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QUN-query.scw
PDB file :
Tito_Scwrl_1QUN.pdb
: