Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEKLFQLKAHNTTVRTEILAGIT----TFLTMAYILFVNPSILGETGMDKGAVFVATCLAAAIGSTIM--GLIANYPIALAPGMGLNAFFTYTVVLHM--GHSWQVALGAVFISATMFFLLSIFRIREWIINSIPLPLRSAIAAGIGLFLALIALQNAGIVVDNPATLIGM----GDLTKPAPILATLG---------------FILIVALEARSV---TGAVLIGILVVTAI-----------------AILLGVTQFGGV--VSMPPS------------LAPTFLQLDIKGALDIGLVSVIFAFLFVDLFDNSGT--LIGVAKRAGLMGKDGHMPKMGRALIADSTAAMGGSLLGTSTTTSYIESAAGVSAGGRTGLTAIVVAILFLLALFFAPLAGSV---------------------PAFATAPALLFVAVLMASGLAEIDWEDITVAAPVVVTALAMP-----FTYSIATGIAFGFISWTAIKVLSGRWRELNPAL----------VILSVLFVIKLGFFNA--------- |
| 4KYI Chain:A ((4-544)) | -GSEISKTEAGQYSVSAPEHKGLVLSGGGAKGISYLGMIQ--ALQERGKIKNLTHVSGASAGAMTASILAVGMDIKDIKKLIEGLDITKLLDNSGVGFRARGDRFRNILDVIYMMQMKKHLESVQQP----IPPEQQMNYGILKQKIALYEDKLS--RAGIVINNVDDIINLTKSVKDLEKLDKALNSIPTELKGAKGEQLENPRLTLGDLGRLRELLPEENKHLIKNLSVVVTNQTKHELERYSEDTTPQQSIAQVVQWSGAHPVLFVPGRNAKGEYIADGGILDNMPEIEGLDREEVLCVKAEAGTAFEDRVNKAKQSAMEAISWFKARMDSLVTSSVLNREKVYYNIDNMIYINTGEVTTTNTSPTPEQRARAVKNGYDQTMQLLDSHKQTFDHPLMAILYIGHDKLKDALIDEKSEKEIFEASAHAQAILHLQEQIVKEMNDGDYSSVQNYLDQIEDILTVDAKMDDIQKEKAFALCIKQVNFLSEGKLETYLNKVEAEAKAAAEPSWATKILNLLWAPIEWVVSLFKGPAQDFK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KYI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -389481 for 3118 contacts (-124.9/contact) +
2D Compatibility (PS) -43055 + (NN) 3868 + (LL) 900
1D Compatibility (HY) -3600 + (ID) 3500
Total energy: -434868.0 ( -139.47 by residue)
QMean score : 0.223
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