Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAALPDLSFHPAWHAQLELAYARAGDATRPVTRRHAGPLRVQKHLYAEGPEVCQHILVHPPGGIAGGDSLAFDVRLGERAWAQLTSPGAAKWYRAACPARQTLEIHLEPGATLEWLPQESIVFAGAQAELETRIQLRGDARLFYWDMVALGRPASGERFASGHFVAALDIRRDDRLLWHERQRIDGGDRLLDSPIGLAGHPVLATLVASGEIDTDLLQRCRALPCAGRGNLSQLPGGLLVARCLADEALHARAWLIELWRLLRPALLGREAVPPRIWST |
| 1VH4 Chain:A ((170-254)) | ---------------------------------------------------------------------HYRHHLDLAEGAEATVIEHFVSL-NDARHFTGARFTINVAANAHLQHIKLAFE-NPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLR---------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VH4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27430 for 570 contacts (-48.1/contact) +
2D Compatibility (PS) -8450 + (NN) 4201 + (LL) 12708
1D Compatibility (HY) -800 + (ID) 650
Total energy: -20421.0 ( -35.83 by residue)
QMean score : 0.046
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