Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGKKKSEKESSWIGEIEKYSRQIWLAGLGAYSKVSKDGSKLFETLVKDGEKAEKEAKSDVDAQVGAAKASARSAKSKVDEVRDRALGKWSELEEAFDKRLNSAISRLGVP-SRNEVKELHSKVDTLTKQIEKLTGVSVKPAAKAAAKPAAKPAAKPAAKTAAAKPAAKPAAKAAAKPAAKPAAKKTAAKTAAAKPAAKPAAKPTAKAAAKPATKPAAKAAAKPAAKPAAAKPAAKPAAKPAAATAAKPAAKPAAKPAAKKPAAKKPAAKPAAAKPAAPAASSSAPAAPAATPAASAPAANAPATPSSQG |
2YY0 Chain:A ((57-84)) | ---------------------------------------------------------------------------------------------------------------PENPEIELLRLELAEMKEKYEAIVEENK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YY0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3785 for 100 contacts (37.9/contact) +
2D Compatibility (PS) -2760 + (NN) -1340 + (LL) 17648
1D Compatibility (HY) -1600 + (ID) 150
Total energy: 15583.0 ( 155.83 by residue)
QMean score : 0.637
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