Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATAPRPLREQYLHFQPISTRWHDNDIYGHVNNVTYYAFFDTAVNTYLIERGGLDIQGGEVIGLVVSSSCDYFAPVAFPQRIEMGLRVARLGNSSVQYELALFLEGQREACAAGRFVHVFVERRSSRPVAIPQELRDALAALQSSAQ
2O6T Chain:K ((7-149))
----PRPLREQYLHFQPISTRWHDNDIYGHVNNVTYYAFFDTAVNTYLIERGGLDIQGGEVIGLVVSSSCDYFAPVAFPQRIEMGLRVARLGNSSVQYELALFLEGQREACAAGRFVHVFVERRSSRPVAIPQELRDALAALQSSAQ
General information:
TITO was launched using:
RESULT:
Template:
2O6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103129 for 1077 contacts (-95.8/contact) +
2D Compatibility (PS) -15355 + (NN) -4966 + (LL) 548
1D Compatibility (HY) -20800 + (ID) 7150
Total energy: -150852.0 ( -140.07 by residue)
QMean score : 0.428
(partial model without unconserved sides chains):
PDB file :
Tito_2O6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O6T-query.scw
PDB file :
Tito_Scwrl_2O6T.pdb
: