Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGWRLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLD-LDRYCAVVVVSKPAARLGLERLDRY---WPQ-PPQQTWCSVGAATAAILEAYGL-DVTYPEQGDDSEALLALPAFQDSLRVHDPKVLIMRGEGGREFLAERLRGQGVQVDYLPLYRRRAPDYPAGELLARVRAERLNGLVVSSGQGLQNLYQLAAAD-W--P-EIGRLPLFVPSPRVAEMARELGAQRVIDCRGASAPALLAALTSAA |
| 1WCW Chain:A ((8-255)) | --AVRVAYAGLR-RKEAFKALAEKLGFTPLLFPVQATEKVPVPE-YRDQVRALAQGVDLFLATTGVGVRDLLEAGKALGLDLEGPLAKAFRLARGAKAARALKEAGLPPHAVGD--GTSKSLLPLLPQG-----RGVAALQLYGK-PLPLLENALAERGYRVLPLMPYRHLPDPEGILRLEEALLRGEVDALAFVAAIQVEFLFEGAKDPKALREALNTRVKALAVGRVTADALREWGVKPFYVDETERLGSLLQGFKRA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126178 for 1968 contacts (-64.1/contact) +
2D Compatibility (PS) -26047 + (NN) -12131 + (LL) 672
1D Compatibility (HY) -5200 + (ID) 2050
Total energy: -170934.0 ( -86.86 by residue)
QMean score : 0.515
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