Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTFAKGILAALALAAAVGQASATELEHWPAPAARQLNALIEANANKGAYAVFDMDNTSYRYDLEESLLPYLEMKGVLTRDRLDPSLKLIPFKDQAGHKESLFSYYYRLCEIDDMVCYPWVAQVFSGFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKR---PILVAGDTPDSDGYMLFNGTAENGVHLWVNRKAKYMEQINGMIKQHSAAQAKAGLPVTADRNWVIVTPEQIQ |
3N28 Chain:A ((177-298)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKE----QLSLD--YAQSNTLEIV---------------SGKLTGQV------L----GEVVSAQTKADILLTLAQQYDVEIHNTVAVGDG-ANDLVMMAAA----GLGVAYHAKPKVEAKAQT------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48814 for 813 contacts (-60.0/contact) +
2D Compatibility (PS) -13751 + (NN) -11810 + (LL) 16488
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -62437.0 ( -76.80 by residue)
QMean score : 0.306
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