Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSLQAKILDPRLGSDFPLPQYATPGSAGLDLRAMLKEDSVLGPGQTLLIPTGLSIYIADPGLAALVLPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRGESPFTIAVGERIAQLVLVPVVQAHFELVEAFDESQRGAGGFGHSGSH
2HQU Chain:A ((30-164))
-----------RLSEHATAPTR---RAAGYDLYSAY--DYTIPPMEKAVVKTDIQIALPS-GCYGRVAPRSGLAAKHFIDVG--AGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERGSGGFGSTGKN
General information:
TITO was launched using:
RESULT:
Template:
2HQU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95159 for 837 contacts (-113.7/contact) +
2D Compatibility (PS) -14110 + (NN) -5154 + (LL) 1072
1D Compatibility (HY) -7600 + (ID) 2450
Total energy: -123401.0 ( -147.43 by residue)
QMean score : 0.388
(partial model without unconserved sides chains):
PDB file :
Tito_2HQU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HQU-query.scw
PDB file :
Tito_Scwrl_2HQU.pdb
: