Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAHVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK
3GLA Chain:A ((3-97))
----------------------------------------WVPRVDIKEEVNHFVLYADLPGID-PSQIEVQMDKG----ILSIRGERKSESSTE---TERFSRIERRYGSFHRRFALPDSADADGITAAGRNGVLEIRIPKR----------------
General information:
TITO was launched using:
RESULT:
Template:
3GLA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50791 for 631 contacts (-80.5/contact) +
2D Compatibility (PS) -10203 + (NN) -5233 + (LL) 4004
1D Compatibility (HY) -5200 + (ID) 1650
Total energy: -69073.0 ( -109.47 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_3GLA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GLA-query.scw
PDB file :
Tito_Scwrl_3GLA.pdb
: