Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGCIKSKGKDSLSDDGVDLKTQPVRNTERTIYVRDPTSNKQQRPVPESQLLPGQRFQTKDPEEQGDIVVALYPYDGIHPDDLSFKKGEKMKVLEEHGEWWKAKSLLTKKEGFIPSNYVAKLNTLETEEWFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSFSLSVRDFDPVHGDVIKHYKIRSLDNGGYYISPRITFPCISDMIKHYQKQADGLCRRLEKACISPKPQKPWDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQYQQQP |
U201 Chain:B ((234-502)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PWDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPG-----AFLEEANLMKTLQHDKLVRLYAVVT-EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIED-----------PIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYP-------MTALS-GYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYT---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: U201.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177831 for 1951 contacts (-91.1/contact) +
2D Compatibility (PS) -26005 + (NN) -11237 + (LL) 14516
1D Compatibility (HY) -40000 + (ID) 12200
Total energy: -252757.0 ( -129.55 by residue)
QMean score : 0.250
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