Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNN-G-LHITGVATSEETNKQAQNLGIPLKSLNDVTEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKLVRNLGKFPLPLEVIPFGWKQVERKLEKEHIQTNLRKQSSGEVYVTNNGNYILDIVNQTFTDAEMWQEKLAQIPGIVEHGLFLHYVDIIICAKANGEIELIKK
1UJ6 Chain:A ((6-226))
-ESYKKEAAHAAIAYVQDGMVVGLGTGSTARYAVLELARRLREGELKGVVGVPTSRATEELAKREGIPLVDLPP-EGVDLAIDGADEIAPGLALIKGMGGALLREKIVERVAKEFIVIADHTKKVPVLGRGPVPVEIVPFGYRATLKAIADLGGEPELRMD-GDEFYFTDGGHLIADCRFGPIGDPLGLHRALLEIPGVVETGLFVGMATRALVAGPFGVEELL--
General information:
TITO was launched using:
RESULT:
Template:
1UJ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94066 for 1935 contacts (-48.6/contact) +
2D Compatibility (PS) -24067 + (NN) -9605 + (LL) 500
1D Compatibility (HY) -15600 + (ID) 4100
Total energy: -146938.0 ( -75.94 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_1UJ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UJ6-query.scw
PDB file :
Tito_Scwrl_1UJ6.pdb
: