Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNNGLHITGVATSEETNKQAQNLGIPLKSLNDVTEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKLVRNLGKFPLPLEVIPFGWKQVERKLEKE----HI--QTNLRKQSSGEVYVTNNGNYILDIVNQTFTDAEMWQEKLAQIPGIVEHGLFLHYVDIIICAKANGEIELIKK
3HHE Chain:A ((25-251))
-QQLKKMAALKALEFVEDDMRLGIGSGSTVNEFIPLLGERVANGLRVTCVATSQYSEQLCHKFGVPISTLEKIPELDLDIDGADEIGPEMTLIKGGGGALLHEKIVASASRAMFVIADETKMVKTLGAFALPIEVNPFGIHATRIAIEKAADNLGLSGEITLRMN-GDDPFKTDGGHFIFDAFWGRILQPKLLSEALLAIPGVVEHGLFLGLASRAIVAMADSQIKVLE-
General information:
TITO was launched using:
RESULT:
Template:
3HHE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110269 for 1879 contacts (-58.7/contact) +
2D Compatibility (PS) -23798 + (NN) -6097 + (LL) 244
1D Compatibility (HY) -20000 + (ID) 4600
Total energy: -164520.0 ( -87.56 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_3HHE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HHE-query.scw
PDB file :
Tito_Scwrl_3HHE.pdb
: