Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLGVIAAAIAVGLGALGAGIGNGLIVSKTVEGVARQPEARSMLQSIMFVGVALVEALPIIAVVIAFMVLNK
1WU0 Chain:A ((1-71))
MSLGVLAAAIAVGLGALGAGIGNGLIVSRTIEGIARQPELRPVLQTTMFIGVALVEALPIIGVVFSFIYLG-
General information:
TITO was launched using:
RESULT:
Template:
1WU0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45860 for 420 contacts (-109.2/contact) +
2D Compatibility (PS) -7367 + (NN) -2255 + (LL) 64
1D Compatibility (HY) -12400 + (ID) 2750
Total energy: -70568.0 ( -168.02 by residue)
QMean score : 0.300
(partial model without unconserved sides chains):
PDB file :
Tito_1WU0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WU0-query.scw
PDB file :
Tito_Scwrl_1WU0.pdb
: