Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAHVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK
4FEI Chain:A ((48-141))
--------------------------------------GPWTPAADWRDAGTHLDLLLDVPGVD-AGTLALAEDGG----QLTVSGERPGT--------EHLLRSERPSGRFVRELAFPEPVRPASGVASLAGGVLTVRFEKLRP--------------
General information:
TITO was launched using:
RESULT:
Template:
4FEI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47020 for 585 contacts (-80.4/contact) +
2D Compatibility (PS) -10350 + (NN) -6147 + (LL) 4300
1D Compatibility (HY) -4000 + (ID) 1450
Total energy: -64667.0 ( -110.54 by residue)
QMean score : 0.444
(partial model without unconserved sides chains):
PDB file :
Tito_4FEI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FEI-query.scw
PDB file :
Tito_Scwrl_4FEI.pdb
: