Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGCGCSSHPEDDWMENIDVCENCHYPIVPLDGKGTLLIRNGSEVRDPLVTYEGSNPPASPLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAKANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPCQTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP |
U206 Chain:B ((232-499)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-----AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-----------PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP-------IQNLE-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: U206.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179289 for 1955 contacts (-91.7/contact) +
2D Compatibility (PS) -26188 + (NN) -15159 + (LL) 11328
1D Compatibility (HY) -38800 + (ID) 12200
Total energy: -260308.0 ( -133.15 by residue)
QMean score : 0.320
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