Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MINQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNNGLHITGVATSEETNKQAQNLGIPLKSLNDVTEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKLVRNLG-KFPLPLEVIPFGWKQVERKLEKEHIQTNLRKQSSGEVYVTNNGNYILDIVNQTFTDAEMWQEKLAQIPGIVEHGLFL-HYVDIIICAKANGEIELIKK |
1M0S Chain:A ((3-218)) | QLEMKKLAAQAALQYVKADRIVGVGSGSTVNCFIEALGTIKD--KIQGAVAASKESEELLRKQGIEVFNANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVDSSKQVDVLGSTFPLPVEVIPMARSQVGRKLAALGGSPEYRE-----GVVTDNGNVILDVHNFSILNPVEIEKELNNVAGVVTNGIFALRGADVVIVGTPEGAKVI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M0S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86456 for 1910 contacts (-45.3/contact) +
2D Compatibility (PS) -23271 + (NN) -6729 + (LL) 76
1D Compatibility (HY) -15200 + (ID) 4150
Total energy: -135730.0 ( -71.06 by residue)
QMean score : 0.479
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