Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLGVIAAAIAVGLGALGAGIGNGLIVSKTVEGVARQPEARSMLQSIMFVGVALVEALPIIAVVIAFMVLNK
2XQU Chain:A ((10-78))
-AASVIAAALAVGIGSIGPGLGQGQAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALVLLFA
General information:
TITO was launched using:
RESULT:
Template:
2XQU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44637 for 403 contacts (-110.8/contact) +
2D Compatibility (PS) -7141 + (NN) -59 + (LL) 208
1D Compatibility (HY) 1600 + (ID) 450
Total energy: -50479.0 ( -125.26 by residue)
QMean score : 0.171
(partial model without unconserved sides chains):
PDB file :
Tito_2XQU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XQU-query.scw
PDB file :
Tito_Scwrl_2XQU.pdb
: