Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHPLLILAFVGAAVAFPSDDDDKIVGGYTCAENSVPYQVSLNAGYHFCGGSLINDQWVVSAAHCYQYHIQVRLGEYNIDVLEGGEQFIDASKIIRHPKYSSWTLDNDILLIKLSTPAVINARVSTLLLPSACASAGTECLISGWGNTLSSGVNYPDLLQCLVAPLLSHADCEASYPGQITNNMICAGFLEGGKDSCQGDSGGPVACNGQLQGIVSWGYGCAQKGKPGVYTKVCNYVDWIQETIAANS
3FP6 Chain:E ((1-223))
-----------------------IVGGYTCQENSVPYQVSLNSGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCNGELQGIVSWGYGCALPDNPGVYTKVCNYVDWIQDTIAAN-
General information:
TITO was launched using:
RESULT:
Template:
3FP6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -164148 for 1932 contacts (-85.0/contact) +
2D Compatibility (PS) -24387 + (NN) -9528 + (LL) 1460
1D Compatibility (HY) -28400 + (ID) 8950
Total energy: -233953.0 ( -121.09 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_3FP6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FP6-query.scw
PDB file :
Tito_Scwrl_3FP6.pdb
: