Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVRSVAWAGFMVLLMIPWGSAAKLVCYFTNWAQYRQGEARFLPKDLDPSL---CTHLIYAFAGMTNHQLSTTEWNDET-------------LYQEFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYS-FDGLDLDWEYPGSQGSP---AVDKERFTTLVQDLANAFQQEAQTSGKER--LLLSAAVPAGQTYVDAG-YEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLY------KRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASS-SDTRVGAPATGSGT-PGPFTKEGGMLAYYEVCSWK--GATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDFAGFSCNQGRYPLIQTLRQELSLPYLPSGTPELEVPKPGQPSEPEHGPSPGQDTFCQGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKCCTWN |
| 1E9L Chain:A ((1-372)) | ---------------------YQLMCYYTSWAKDRPIEGSFKPGNID---PCLCTHLIYAFAGMQ-------------NNEITYTHEQDLRDYEALNGLKDKNTELKTLLAIGGWKFGPAPFSAMVSTPQNRQIFIQSVIRFLRQY-NFDGLNLDWQYPGSR---GSPPKDKHLFSVLVKEMRKAFEEESVEKD--IPRLLLTSTGAGIIDVIKSGY-KIPELSQSLDYIQVMTYDLHDPKDGYTGENSPLYKSPYDI------GKSADLNVDSIISYWKDHGAASEKLIVGFPAYGHTFILSD-PSKTGIGAPTISTG-PPGKYTDESGLLAYYEVCTFLNEGATEVWDAPQEVPYAYQGNEWVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDMDDFSGSFCHQRHFPLTSTLKGDLN----IHSAS----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165318 for 2906 contacts (-56.9/contact) +
2D Compatibility (PS) -36231 + (NN) -17184 + (LL) 4936
1D Compatibility (HY) -35200 + (ID) 8250
Total energy: -257247.0 ( -88.52 by residue)
QMean score : 0.515
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