Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASRYVAVGMI-LSQTVVGVLGSFSVLLHYLSFYCTGCRL-RSTDLIVKHLIVANFLALRCKGVPQTMAAFGVRYFLNALGCKLVFYLHRVGRGVSIGTTCLLSV--FQVITVSSRKSRWAKLKEKAPKHVGFSVLLCWIVCMLVNIIFPMYVTGKWNYTNITVNEDL-------GYCSGGGNNKIAQTLRAMLLSFPD-VLCLGLMLWVSSSMVCILHRHKQRVQHIDR-----------------------------------------------------------------------------------------------------------------------------------------------------SDLSPRASPENRATQSILILVSTFVSSYTLSCLFQVCMALLDN---PNSLLVNTSALMSVCFPTLSPFVLMSCDPSVYRFCFAWKR |
| 3EML Chain:A ((23-466)) | ------VYITVELAIAVLAILGNVLVCWA----VWLNSNLQNVTNYFVVSLAAADIAVGVLA-IPFAITIST-GFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIR-IPLRYN----GLVTGTRAKGIIAICWVLSFAIGLTPM-LGWNNCGQ--------SQGCGEGQVACLFEDVVP--MNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160205 for 2029 contacts (-79.0/contact) +
2D Compatibility (PS) -27621 + (NN) -6989 + (LL) 2756
1D Compatibility (HY) -18800 + (ID) 1900
Total energy: -212759.0 ( -104.86 by residue)
QMean score : ?
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