Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------MLKLVII--------ENMAEIML-------------FSLDLLLFSTDILCFNFPSKMIKLPGFITIQIFFYPQASFGISANTILLLFHI-----FTFVFSHRSKSIDMIISHLS---------LIHILLLFTQAILVSLDFFGSQN-T-QDDLRYKVIVFLNKVMR----------------GLSICTPCLLSVL----QAIISPSIFSLAKLKH------PSASHILGFFLFSWVLNMFIGV--------IFCCTLRLPPVKRG-------QSSVCHTALFLFAHELHP---------------------------QETVFHTNDFEGCHLYRVHGPLKRLHGDYFIQT-IRGYLSAFTQPACP-----RVSPVKRASQAILLLVSF---VFTYWVDFTFSFSGGVTWINDSLLVWLQVIVANSY-AAI--------SPLMLIYADNQIFKTLQM---------LWF-KYLSPPKLMLKFNRQCGSTKK-- |
| 5BP8 Chain:A ((6-520)) | APREAEAAALLAATVADPWGLVAPSVYDTARLVSLAPWLDGHRERLGYLAKEQNQDGSWGAPDGYGLVPTLSAVEALLTELARTDSGAPH-LSPDDLAAACADGLGALRDGLLAGPVPDTIGVEFVAPSLLADINTRLAALTEQAPGKLGAWSGTTLTSPAPDLDGALLAGVREMTEQAPLPEKLWHTLEAVTRDGTRGARPHEGAPPHNGSVGCSPAATAAWLGAAPDPAAPGVAYLRDVQARFGGPVPSITPI-VYFEQAWVLNSLAASGLRYEAPAALLDSLEAGLTDEGIAAAPGLPSDSDDTAAVLFALAQHGRTHRPDSLMHFRRDGYFSCFGVERTPSTSTNAHILEALGHHVTVRPDDAGRYGAEI---RMISDWLLDNQLPDGSWMDKWHASPYYATACCALALAEFGGPSARAAVDRAAAWALATQRADGSWGRWQGTTEETAYMVQLLMRTRTPGSPGTVARSAARGCDALLAHDDPASYPGLWHDKDIYAPVTVIRAARLAALALGGA |
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General information:
TITO was launched using:
| RESULT:
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Template: 5BP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -242245 for 2629 contacts (-92.1/contact) +
2D Compatibility (PS) -34204 + (NN) 944 + (LL) 764
1D Compatibility (HY) 19200 + (ID) 1100
Total energy: -256641.0 ( -97.62 by residue)
QMean score : 0.094
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