Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------VVCSSVELNVCTPALVMS-------------SEPSKLCCQKAME-QRPCYCEFLRD--------PNLKQFFSNAADRRLANACGFPYPVCGY
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHN--LPIECNLMSQPCQM
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42790 for 439 contacts (-97.5/contact) +
2D Compatibility (PS) -6882 + (NN) -2622 + (LL) 200
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -56444.0 ( -128.57 by residue)
QMean score : 0.345
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: