Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MNYLICLKNLIREVIE-GKVKEVVIDKGNKYYQVSKNTDKELLDGIMCKSKLKTKLLHSVK
2Q6Q Chain:A ((3-64))
QQNKELNFKLREKQNEIFELKKIAETLRSKLEKYVDITKKLEDQNLNLQIKISDLEKKLSDA--
General information:
TITO was launched using:
RESULT:
Template:
2Q6Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4048 for 217 contacts (18.7/contact) +
2D Compatibility (PS) -5911 + (NN) -2380 + (LL) 256
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -5887.0 ( -27.13 by residue)
QMean score : 0.324
(partial model without unconserved sides chains):
PDB file :
Tito_2Q6Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q6Q-query.scw
PDB file :
Tito_Scwrl_2Q6Q.pdb
: