Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEEPVEKKWRIKRSAARFLAVQVAYSNIFMGYDKSTFELENCGLRNYVGKLADIFECEEFDYQFLEKLLYKVIRSGGEYDKIIEYYLHPSWSLLRLNLVSLSILRVAVCELAN-CDTPAPVVINEYTNIASDLL--DKPSEIGFINGLLDKAKSAVKLNKNS
1EYV Chain:B ((52-137))
--------------------------------------------------------------HPYTAAVARGVSEHAAHIDDLITAHLR-GWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELSTDDSP---GFVNGVLGQVM---------
General information:
TITO was launched using:
RESULT:
Template:
1EYV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58626 for 551 contacts (-106.4/contact) +
2D Compatibility (PS) -8470 + (NN) -556 + (LL) 5924
1D Compatibility (HY) -5200 + (ID) 1550
Total energy: -68478.0 ( -124.28 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_1EYV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EYV-query.scw
PDB file :
Tito_Scwrl_1EYV.pdb
: