Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSKSAFNSLDPALLYKGDLLRRMLFTLIALICYRLGTYVPIPGINLDIINDIFPKEGAGIFGVFNLFSGGALARMTILVLNVMPYIVASIVMQLLSSAVKGINEVKNDGELGRRRMNSYIRYMTIVFCIFQSVTILIGLERMNREGTLVVIEPGVMFRTVGIFSLLGGTMFLIWLGEQISA-SGIGNGISLIIFTGIISELHNAFSFLLTLN--------KN------------GS----------MSLLIILFVFVLFFLLLLLIIFVESSYRKVTVQYPKKQFKRLHSDDFTYIPLKINLSGVIPTIFANAILLTPVSIANFYKGHAF--------SDF----------------ILNYFM--------ANKVVYIAAYLALIVFFNFFYTNF-----IFNPEENADFLKKNGGFIPGRRPGKHTSDYLQDIVFKLTFIGSAYLVVICTVPEVMRYYYDMPFIFGGTSLLIIVNVTTDTIMQIQSYIFSNRYDSWIKKYESKTKKLR |
| 2WWB Chain:A ((21-472)) | ------------KPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSA-------DPFYWM-RVILA--SNRGTLMELGISPIVTSGLIMQLLAGAKII--EV-GDTPKDRALFNGAQKLFGMIITIGQSIVYVMTGMYGDP------SEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGMEFEGAIIALFHLLATRTDKVRALREAFYRQNLPN-LMNLIATIFVFAVVIYFQGFRVDLPIKSARYR------GQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSARFSGNLLVSLLGTWSDTSSGGPARAYPVGGLCHYLSPPESFGSVLEDPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETS-MVHELNRYIPTAAAFGGLCIGALSVLADFLGAI------GSGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -311367 for 2900 contacts (-107.4/contact) +
2D Compatibility (PS) -39449 + (NN) -2718 + (LL) 3052
1D Compatibility (HY) -22400 + (ID) 3300
Total energy: -376182.0 ( -129.72 by residue)
QMean score : 0.231
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