Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKYNNIVKCPIITEKASFLREKFNKYSLYVFVNVNKHKIKSAIESLFNVKVSSINVVRVKPKYRRFKGVVGYEKKKKKVYFSLMDGQ-KLDIMSV
3J3W Chain:T ((1-95))
MKDPRDVLKRPVITERSADLMT-EKKYTFEVDVRANKTEVKDAVESIFGVKVDKVNIMNYKGKSKRVGRYTGMTSRRRKAIVKLTADSKEIEIFEA
General information:
TITO was launched using:
RESULT:
Template:
3J3W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31131 for 585 contacts (-53.2/contact) +
2D Compatibility (PS) -10259 + (NN) 545 + (LL) 64
1D Compatibility (HY) -6400 + (ID) 1450
Total energy: -48631.0 ( -83.13 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_3J3W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J3W-query.scw
PDB file :
Tito_Scwrl_3J3W.pdb
: