Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILFSLLFSQSNTGARVILDKEIFYTELDGKMDLRFSYTFNKDSFNIKPKDKTSSYSYLRLFYLQRVYPNTQMGFNIKAEVSNISNLKALDIEKLNMEEWYFIIKNQGLGSIEYGKRNLVSQSMLINTSKIYVAAGGANGYWANYANLLGNEKKDDGAGYDKDEVFWVKPSIYSNYSGLKLKLKQPVVSYISPEIYNFQLGLSYVPGKNNLQYNNLVASGLSYKNGLSDDISFTTTLTGEFARGDLADCTNKNPSNLQCHNQLLHWNFGLKLKFFNLDCIFSYGNSGKSGKKLDSEVSSTYYMNAGVAYRSDS-RKLSLTYFSGGQDIIGKGINKLTSYALSLEYPLFMGTSYYFDIVKFNTEEPKVMNNNSGYILLAGLKLIF |
| 3PRN Chain:A ((133-261)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IAVTY--SI-SG--VNLYLSYVDPDQTVD-----------SSLVTEEFGIAADWSNDMISLAAAYTTDAGG-------IVDNDIAFVGAAYKFNDAGTVGLNWYDNGL------STAGDQVTLYGNYAFGA-TTVRAYVSDIDRA-------GADTAYGIGADYQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PRN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31570 for 767 contacts (-41.2/contact) +
2D Compatibility (PS) -13676 + (NN) -3123 + (LL) 13520
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -37099.0 ( -48.37 by residue)
QMean score : 0.107
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