Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MVKLTTKIASLKLFASYAIATYILVMLTSALNLFKGYVADTFYIAETLLIILTIILIIIL-----TTEQTWKHH--DLWRRIVEVLLLLMALTGNVFTLLMFVSIRRYQ--RTSQIHSYNGWESFIR--------KTTRHRIAIIGLLILVYMLTLSI-----VSQFTFDTTLATKNQFN-----------------ALLHGPSLAYPF----GTDDFGRDL----FTRVVVGTKLTFSISIISVVIAVIFGVLLGTIA-----------------GYFNHIDNLIMRILDVVFAIPSLLLAVAIIASFGASIPNLIIALSIGNIPSFARTM-----------RASVLEIKRMEYVDAARITGENTWNIIWRYILPNA--IAPMIVRFSLNIGVVVLTTSSLSFLGLGVAPDVAEWGNILRTGSNYLETHSNLAIVPGVCIMFVVLA-----------------------FNFIGDAVRDALDPRIH------- |
| 3DH4 Chain:A ((52-518)) | AGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILGIPLMYSILGLALFALVYSIVVWTDVIQVFFLVLGGFMTTYMAVSFIGGTDGWFAGVSKMVDAAPGHFEMILDQSNPQYMNLPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLKLIVPFLVVLPGIAAYVITSDPQLMASLGDIAATNLPSAANADKAYPWLTQFLPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDSGDHKLVNVGRTAAVVALIIACLIAPMLGGIGQAFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFLKFMPLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDDPKGISVTSSMFVTDRSFNIAAYGIMIVLAVLYTLFWVLYK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DH4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192349 for 2695 contacts (-71.4/contact) +
2D Compatibility (PS) -36058 + (NN) 10128 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 1350
Total energy: -222829.0 ( -82.68 by residue)
QMean score : 0.112
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