Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTIDFSDHTGLVKDAWYKQIEDLLEFAKKEEHIEDDAELSVTFVDKQEIQEINRTYRDKDKVTDVISFALEEDEPEIDFSGLDIPRVLGDIIICTDVAQEQANNYGHSFERELGFLALHGFLHLLGYDHMTEADEKEMFGRQDTILNAYGLTRD
1XM5 Chain:D ((36-145))
----------------------------------QEESEVTIRVVDTAESHSLNLTYRGKDKPTNVLSFPFEVP-PGMEMS------LLGDLVICRQVVEKEAQEQGKPLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALG----
General information:
TITO was launched using:
RESULT:
Template:
1XM5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39799 for 718 contacts (-55.4/contact) +
2D Compatibility (PS) -12092 + (NN) -5424 + (LL) 3400
1D Compatibility (HY) -10400 + (ID) 2100
Total energy: -66415.0 ( -92.50 by residue)
QMean score : 0.636
(partial model without unconserved sides chains):
PDB file :
Tito_1XM5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XM5-query.scw
PDB file :
Tito_Scwrl_1XM5.pdb
: