Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIDQQTIYQYIQNGKIEEALQALFGNIEEDPTIIENYINAGIVLADANEIEKAERFFQKALTIDPKNGV-VFYNLANVYYNQQRYQEAIKLYQQALQTEIEQVDCNYMIGMAFNQLESFKLALPYLMTAAELDKDKDAEVQFQYGLVLCQLEMFNEAITQLKHVLTIDKNHVDARYNLGLALFMKNEDIDEAITHFKEAVTIDPKHLLSQHALKTFTKMKEEE |
1NA0 Chain:B ((7-120)) | ------------------------------------------------------------------NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66524 for 878 contacts (-75.8/contact) +
2D Compatibility (PS) -12059 + (NN) -8055 + (LL) 9400
1D Compatibility (HY) -3200 + (ID) 1950
Total energy: -82388.0 ( -93.84 by residue)
QMean score : 0.559
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