Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVPDRRVSKTRAAKRRTHYSVKLAKPV--KAKDGTWKLP------HHINKFTKEY
2F9I Chain:B ((27-58))
------------------------AGIMTKCPKCKKIMYTKELAENLNVCFNCDHH
General information:
TITO was launched using:
RESULT:
Template:
2F9I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9355 for 94 contacts (99.5/contact) +
2D Compatibility (PS) -2326 + (NN) 318 + (LL) 2052
1D Compatibility (HY) -800 + (ID) 100
Total energy: 8499.0 ( 90.41 by residue)
QMean score : 0.344
(partial model without unconserved sides chains):
PDB file :
Tito_2F9I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F9I-query.scw
PDB file :
Tito_Scwrl_2F9I.pdb
: