Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVLKLHVKAFRFETNKDYNPAYESYFLEYQEDQYLLDLLKQLK-GVSYNE---NIALKINQIAVFE-DAKVSDLVAFFSKEWVLDPLSKRYALKDLMIDEKEVLKNYEDFFKQVPYITKGEKEELEKFIQINFINPQTNPKYLGDGFFLYVKWLMKRYPTERNRLLEMISKPESGVMNFLSVAHYLYKNDDNIDHEIYELQEMLTNSKIKPWKDFSKNLLSLFQYNSNPPKTPNPPKTCALFNAYAKHLNAQALLKSAKLYLERMGQKVIDLPFCYDGGYYGKIISTHDFLTACAYNLALAKANGVSLIFCEEDSYLNILHAKEVLDNNPEIIDSVNEKLKKYQLVYEKGVEVVYLNEWVNEFLAWELKSPFDAFLGAEFSRIKPSDHFFNKIHLKAPHFLESFQNYAPLLEVNEVSGLLQCAHLRYLGIDLGADFLIVHSLGLFHAFENLSLKASKIYKRDNDNTPTLFLPQIALMAMGEKNKQTLGLDAHYHKVTFI |
| 3RPF Chain:C ((15-69)) | --------------------------NFFIK-ANDLKELRAILQEKEGLKEWLGVCAIALNDHLIDNLNTPLKD-----GDVISLLPPVCGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RPF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15734 for 239 contacts (-65.8/contact) +
2D Compatibility (PS) -5387 + (NN) 67 + (LL) 31076
1D Compatibility (HY) -2000 + (ID) 450
Total energy: 7572.0 ( 31.68 by residue)
QMean score : 0.597
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