Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKILVIGDLIADYYLWGKSERLSPEAPVPVLEVKKESKNLGGAANVANNLTSLKAKVFLCGVVGDDLEGKHFISTLKTRGIDTSGVLIDKTRCTTLKTRIIAQNQQIVRVDKEIKDPLNADLRKNLLDFIAEKIQEIDGVILSDYNKGVLDFELTQTIITLANKHHKLILCDPKGKDYSKYSHASLITPNRAELEQALHLKLDSHANLSKALQILQETYHIAMPLVTLSEQGIAFLEKGELVNCPTIAKEVYDVTGAGDTVIASLTLSLLESKSLKEACEFANAAAAVVVGKMGSALASLEEIALILNQTHPKILPLEKLLETLERNQQKIVFTNGCFDILHKGHASYLQKAKALGDILVVGLNSDNSIKRLKGDKRPIVSEKDRAFLLASLSCVDYVVVFGEDTPIKLIQALKPDILVKGADYLNKEVIGSELAKETRLIEFEEGYSTSAIIEKIKRTHND |
4E8Z Chain:B ((55-350)) | --RVLVVGDVMLDRYWFGNVDRISPEAPVPVVHVQRQEERLGGAANVARNAVTLGGQAGLLCVVGCDEPGERIVELLGSSGV-TPHLERDPALPTTIKLRVLARQQQLLRVDFEAM-PTHEVLLAGLARFDVLLPQH-DVVLMSDYAKGGLTH--VTTMIEKARAAGKAVLVDPKGDDWARYRGASLITPNRAELREVVG-QWKSEDDLRARVANLRAELDIDALLLTRSEEGMTLFSAGGELHAPAL--EVFDVSGAGDTVIATVATMLGAGVPLVDAVVLANRAAGIVVGKLGTATVDYDELFH------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E8Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159684 for 2523 contacts (-63.3/contact) +
2D Compatibility (PS) -31497 + (NN) -11314 + (LL) 12832
1D Compatibility (HY) -22000 + (ID) 6000
Total energy: -217663.0 ( -86.27 by residue)
QMean score : 0.444
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